>>>INHIBITORS OF PROTEASES<<<
As stated in Zinsser Microbioloby book, many viral proteins are synthesized in the form of precursors that must be cleaved in order to yield the functional proteins required. Often, such as in the case of picornaviruses, the togaviruses, and the retroviruses, these cleavages are effected by highly specific virus-encoded proteases that are prime targets for interference with virus multiplication. In particular, the three-dimensional structure of the HIV protease, which cleaves both the gag and env protein precursors has been solved at the atomic level by x-ray crystallographic analysis; strenuous efforts are now being made, with the use of computer modeling, to design inhibitors of it. This approach is also promising for viruses like the coronaviruses, the paramyxoviruses, and the orthomyxoviruses in which envelope glycoproteins such as the fusion proteins and the hemagglutinins must be cleaved to permit these viruses to infect cells effectively. These cleavages, which occur in basic amino acid sequences are carried out by host proteases that are often referred to as trypsin-like. In the case of influenza virus it has been shown that peptidyl chloroalkyl ketones ( which bind covalently to the substrate-binding sites of proteolytic enzymes ) strongly inhibit virus multiplication when they contain a palmityl residue, as wel as at least two adjacent amino acids (e.g. , palmityl-fluorophenylalanine-alanine-lysine-arginine-chloroethylketone)
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